Modules Update December 2023¶
Since the last module update in December 2022, we have:
- added/moved 61 modules to production
- added 2 modules to the development environment
- deprecated 3 modules
- deleted 12 modules
The following 61 module files have been added or moved to production:
| Application Name | Application Version | Set as Default? |
|---|---|---|
| alphafold | 2.3.2 | Yes |
| anaconda3 | 2023.03 | Yes |
| ansys | 2023R2 | Yes |
| castep | 23.1-intel | Yes |
| cellranger | 7.1.0 | Yes |
| colmap | 3.8-gpu | Yes |
| comsol | 6.0 | Yes |
| cp2k | 2023.1 | Yes |
| cp2k | 2023.1-avx512 | No |
| cst_studio | 2022 | No |
| cst_studio | 2023 | Yes |
| cuda | 11.8.0 | Yes |
| cuda | 12.0.0 | No |
| cuda | 12.2.1 | No |
| cudnn | 8.8.1-cuda12 | No |
| cudnn | 8.9.4-cuda12.2 | No |
| dua | 2.20.1 | Yes |
| fsl | 6.0.4 | Yes |
| git | 2.39.2 | Yes |
| gromacs | 2022.2-gpu | No |
| gromacs | 2022.2-intelmpi | Yes |
| hdf5 | 1.14.1-2 | No |
| hdf5 | 1.14.1-2-nv | No |
| imagemagick | 7.1.1-6 | Yes |
| isaac-aligner | 04.18.11.09 | Yes |
| jags | 4.3.1 | Yes |
| jags | 4.3.2 | No |
| java | 1.8.0_382-openjdk | No |
| java | 11.0.20-openjdk | No |
| java | 20.0.2 | No |
| lammps-gpu | 2Aug2023-ampere | Yes |
| lammps-gpu | 2Aug2023-volta | No |
| lammps | 2Aug2023 | Yes |
| libsodium | 1.0.19 | Yes |
| macaulay2 | 1.21 | Yes |
| maple | 2023 | Yes |
| mathematica | 13.2.1 | Yes |
| matlab | 2023a | Yes |
| meshlab | 2022.02 | Yes |
| nanopore_guppy | 6.5.7 | Yes |
| neovim | 0.8.3 | No |
| neovim | 0.9.0 | Yes |
| nextflow | 22.10.4 | Yes |
| nvtools | 1.0.0 | Yes |
| openssl | 1.1.1s | Yes |
| orca | 5.0.3 | Yes |
| postgres | 15.1 | Yes |
| python | 3.10.7 | No |
| qctool | 2.2.0 | Yes |
| R | 4.2.2 | Yes |
| R | 4.2.2-gcc10 | No |
| relion | 4.0-gpu | No |
| shapeit5 | 5.1.1 | Yes |
| starccm | 2302.0001-R8 | Yes |
| stata | 18 | No |
| tensorRT | 8.6.1.6-cuda12.2 | No |
| vasp | 6.3.1-gpu-hdf5 | No |
| vasp | 6.3.1-hdf5 | No |
| vasp | 6.4.0 | No |
| vasp | 6.4.0_wannier90 | No |
| vasp | 6.4.2 | Yes |
The following 2 module files have been added to the development environment:
| Application Name | Application Version |
|---|---|
| julia | 1.9.4 |
| python | 3.11.6 |
The following 3 module files have been deprecated:
| Application Name | Application Version |
|---|---|
| bwa-mem2 | 2.2.1 |
| fastqc | 0.11.8 |
| starccm | 2210.0001-R8 |
The following 12 module files have been deleted:
| Application Name | Application Version |
|---|---|
| fsl | 6.0.4 |
| git | 2.34.4 |
| gurobi | 9.1.2 |
| java | 1.8.0_121-oracle |
| java | 1.8.0_152-oracle |
| java | 1.8.0_171-oracle |
| java | 1.8.0_241-oracle |
| java | 11.0.2 |
| cp2k | 5.1-openmpi-nxn |
| cp2k | 6.1.0-nxn |
| dl_poly | 4.08-openmpi-gcc-nxn |
| maple | 2020 |
All ppc64le modules were deleted as the ppc64 nodes were retired.