Modules Update December 2019¶
Since the last module update in August, we have added 22 modules to dev, added 22 modules to production and removed 4 modules.
The following module files have been updated:
| Application Name | Application Version | Arch | Status | Set as Default? |
|---|---|---|---|---|
| ant | 1.10.6 | x86_64 | moved from dev to production | yes |
| autoconf-archive | 2019.01.06 | x86_64 | added to production | N/A |
| bamqc | 4b3d20f | x86_64 | added to dev | N/A |
| bismark | 0.22.1 | x86_64 | added to production | yes |
| castep | 19.1-intel | x86_64 | added to dev | N/A |
| caviar | 2.2.0 | x86_64 | added to dev | N/A |
| cellranger | 3.1.0 | x86_64 | added to production | yes |
| cmake | 3.16.0 | x86_64 | added to dev | N/A |
| cp2k | 6.1.0 | x86_64 | added to dev | N/A |
| cuda | 10.1.243 | x86_64 | added to dev | N/A |
| cudnn | 7.6-cuda-10.1 | x86_64 | added to dev | N/A |
| drop-seq | 2.3.0 | x86_64 | added to dev | N/A |
| fastqc | 0.11.8 | x86_64 | moved from production to deprecated | N/A |
| fgsl | 1.3.0 | x86_64 | added to dev | N/A |
| flye | 2.6 | x86_64 | added to production | yes |
| freebayes | 1.3.1 | x86_64 | added to dev | N/A |
| gatk | 4.1.4.0 | x86_64 | added to dev | N/A |
| go | 1.13.1 | x86_64 | added to production | yes |
| go | 1.13.4 | pcc64le | added to dev | N/A |
| gsl | 2.4 | x86_64 | modified | N/A |
| hyphy | 2.5.1 | x86_64 | added to dev | N/A |
| jellyfish | 1.1.12 | x86_64 | added to production | no |
| kraken | 1.1.1 | x86_64 | added to production | yes |
| ldhelmet | 1.10 | x86_64 | added to production | yes |
| libfabric | 1.9.0 | x86_64 | added to dev | N/A |
| mutscan | 1.14.0 | x86_64 | added to dev | N/A |
| nagfor | 6.2-6227 | x86_64 | removed from production | N/A |
| nagfor | 6.2-6243 | x86_64 | added to production | yes |
| naglib | fll6i26d9l | x86_64 | added to dev | N/A |
| naglib | fll6i26dfl | x86_64 | added to dev | N/A |
| nextflow | 19.04.1 | x86_64 | moved from dev to production | yes |
| pandoc | 1.19 | x86_64 | added to production | yes |
| pgi | 18.10 | x86_64 | moved from production to deprecated | N/A |
| pgi | 19.10 | x86_64 | added to production | yes |
| R | 3.6.1 | x86_64 | added to production | yes |
| relion | 3.1b | x86_64 | added to dev | N/A |
| relion | 3.1b-gpu | x86_64 | added to dev | N/A |
| rsem | 1.3.1 | x86_64 | added to production | yes |
| sbcl | 1.5.4 | x86_64 | moved from dev to production | yes |
| singularity | 3.5.1 | x86_64 | added to dev | N/A |
| slim | 3.3 | x86_64 | added to dev | N/A |
| sqlite | 3.29.0 | x86_64 | moved from dev to production | yes |
| stacks | 2.41 | x86_64 | moved from dev to production | yes |
| starccm | 2019.1.1-R8 | x86_64 | added to production | no |
| supernova | 2.1.1 | x86_64 | added to production | yes |
| sweed | 3.3.2 | x86_64 | moved from production to deprecated | N/A |
| vcftools | 0.1.16 | x86_64 | added to dev | N/A |
| wtdbg2 | 2.5 | x86_64 | added to production | yes |
| zstd | 1.4.3 | x86_64 | added to production | yes |